hammerlab / guacamole / 2452
78%

DEFAULT BRANCH: master
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Jobs 1
Files 130
Run time 9s
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Merge pull request #581 from ryan-williams/adam

"upgrade" adam to forked "0.20.0"

48 of 48 new or added lines in 13 files covered. (100.0%)

2367 of 2998 relevant lines covered (78.95%)

0.79 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
47.85
 3.06% src/main/scala/org/hammerlab/guacamole/commands/VAFHistogram.scala
2
12.9
 0.0% src/main/scala/org/hammerlab/guacamole/variants/Concordance.scala
4
30.16
 0.16% src/main/scala/org/hammerlab/guacamole/variants/GenotypeOutputArgs.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
80.0
 -20.0% src/main/scala/org/hammerlab/guacamole/filters/somatic/SomaticReadDepthFilter.scala
1
30.16
 0.16% src/main/scala/org/hammerlab/guacamole/variants/GenotypeOutputArgs.scala
1
91.14
 -1.27% src/main/scala/org/hammerlab/guacamole/pileup/PileupElement.scala
1
88.89
 -11.11% src/main/scala/org/hammerlab/guacamole/loci/map/Builder.scala
1
94.03
 9.59% src/main/scala/org/hammerlab/guacamole/commands/SomaticJointCaller.scala
29
47.85
 3.06% src/main/scala/org/hammerlab/guacamole/commands/VAFHistogram.scala
Jobs
ID Job ID Ran Files Coverage
1 2452.1 130
78.95
 Travis Job 2452.1
Source Files on build 2452
Coverage ∆ File Lines Relevant Covered Missed Hits/Line