24587526953
76%
master: 76%

Ran 17 Apr 2026 09:30PM UTC

Jobs 2

Files 3

Run time 1min

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Committed 17 Apr 2026 09:28PM UTC coverage: 76.316% (-8.9%) from 85.197%

Build # 24587526953

Build Type

push

github

Committed by

cokelaer

Commit Message

Fix: use bash instead of sh to execute pipeline script

The generated pacbio_qc.sh script uses bash-specific features like 'set -o pipefail'
which are not supported in POSIX sh. Changed subprocess.call to use ['bash', 'pacbio_qc.sh']
instead of 'sh pacbio_qc.sh' to match the standard execution pattern and avoid the
'Illegal option -o pipefail' error in CI environments.

Coverage Stats

29 of 38 relevant lines covered (76.32%)

0.76 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	24587526953.1	17 Apr 2026 09:30PM UTC	3	76.32	GitHub Action Run
2	24587526953.2	17 Apr 2026 09:30PM UTC	3	76.32	GitHub Action Run

cokelaer / pacbio_qc / 24587526953
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master: 76%

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cokelaer / pacbio_qc / 24587526953
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