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openvax / varcode / 24433985774
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Ran 15 Apr 2026 02:59AM UTC
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#271 stage 2: apply_variant_to_transcript builds MutantTranscript (#303)

Stage 2 of #271: apply_variant_to_transcript builds MutantTranscripts from Variant + Transcript, with reverse-strand and mitochondrial codon table handling. Returns None for intronic/non-coding/splice-spanning cases. 584 tests pass. Next: sequence_diff annotator wiring Variant.effects(annotator=...).
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