24417066648
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Ran 14 Apr 2026 06:56PM UTC

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Build # 24417066648

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push

github

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web-flow

Commit Message

Fix variant-count summary to be properly nested (#205) (#226)

* Fix variant-count summary to be properly nested (#205)

The patient-info section labels the three counts as nested subsets
("Somatic variants with predicted coding effects", "... and RNA
support", "... and predicted MHC ligands"), but the underlying
sums were independent booleans. A variant with RNA support but no
coding effect inflated the RNA-support count above the coding-effect
count — user-reported case had 14 coding, 18 RNA, 6 ligand.

AND-chain the categories so each count is a subset of the previous.

* Add regression tests pinning nested-subset invariant (#205)

Three tests covering:
- The full coding/rna/peptide grid so the AND-chain matters at each step
- The #205 regression case: a non-coding variant with RNA support
  must not inflate num_variants_with_rna_support
- Empty results

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