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Fix e2e CLI drift and bump simplify/optimize timeouts

The cli_full_cycle e2e test had three unrelated drift issues that
surfaced once the suite actually ran against a live Claude agent:

- kvelmo backup takes the output path as a positional arg, not a
  --output flag. The test was calling "backup --output <path>"
  which returned "unknown flag" every run (best-effort, so it did
  not fail the suite but was noise).
- kvelmo has no "access" command. The test was calling
  "access list" as a smoke check for a command that never existed
  in this tree. Drop the line entirely — if an access feature is
  added later, the test can be rewired.
- waitForState("implemented", 5*time.Minute) after simplify and
  optimize was marginal for real Claude. Median phase duration is
  3-5 minutes and real variance pushes the upper tail well past 5
  minutes for longer implementations. Bump the per-phase timeout
  to 10 minutes (2x headroom over the flake point) so the test
  only waits long when something is genuinely stuck.

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