IGVF-DACC / igvf-catalog / 221c8a79-e734-4d7a-ae15-3c59c021b8d2

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circleci

DSERV-1196-remodel-MPRA (#638)

* include sample term for induced samples

* combine MPRA adapters

* write all insigificant or not

* remodeled as variants_biosamples

* fix

* example data

* simplify adapter call

* adapter label fixed

* label --> key

* removed element_name

* duplicate line

* Engreitz MPRA

* files filesets update

* replace files_filesets

* NaN in bed_score

* safe_float restored

* restore more stuff

* ref element only

* test fix

* fixed expectations

* controls

* strand on genomic element

* revert strand on genomic element

* black list

* more black list

* more black list

* adjusted mixed case

* skip instead of error

* exclusion list

* overlapping elements w same variant case

* strand taken into account

* fix source_url

* files filesets update

* fix tests

296 of 368 branches covered (80.43%)

Branch coverage included in aggregate %.

12870 of 14766 relevant lines covered (87.16%)

1.11 hits per line