FlexMeasures / flexmeasures / 23144208962

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refactor: migrate from pip-tools to uv for dependency management (#1973)

* refactor: migrate from pip-tools to uv for dependency management

Replace the pip-tools based dependency management workflow with uv,
consolidating all dependencies into pyproject.toml and a single uv.lock file.
This simplifies and speeds up the development setup greatly.

Changes:
- Switch build backend from setuptools to hatchling
- Move all dependencies from requirements/*.in to pyproject.toml
- Remove setup.cfg in favour of .flake8 and pyproject.toml
- Remove Makefile in favour of poethepoet tasks
- Upgrade main python version (CI/CD, .python-version, etc.) to 1.12
- Use Ubuntu LTS latest for readthedocs.yaml
- Refactor and update Dockerfile to use uv for installation
- Upgrade the Debian version in the Dockerfile from bookworm to trixie
- Add .python-version for consistent Python version management
- Replace pip-tools with uv in all CI/CD workflows
- Remove legacy build and update scripts (to_pypi.sh, ci/update-packages.sh, ci/run_mypy.sh)
- Update documentation to reflect changes

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* docs: update changelog.rst

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* feat: add compatiblity Makefile with deprecation warnings

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* fix: fix typo

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* fix: fix UV warnings by using recommended UV_LINK_MODE=copy environment variable

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* fix: fix minor dependency issues. Switch to UV and pre-commit-uv for pre-commit checking in CI. Remove pre-commit as dev dependency (docs already recommend using `uv tool install pre-commit`). Fix Flake8 scanning the .venv folder.

Signed-off-by: Stijn van Houwelingen <teadrinkingprogrammer@github.io>

* fix: ignore B902 and E226 flake8 errors

Signed... (continued)

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