broadinstitute / viral-phylo / 21520228048

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master: 46%

Pull #70

github

Add CLAUDE.md with development guidance for Claude Code

Provides comprehensive documentation for AI-assisted development including:
- Docker-centric testing workflow with viral-phylo and viral-core images
- Architecture overview of intrahost.py, interhost.py, and ncbi.py commands
- Module structure documentation for phylo/ package
- Testing requirements and fixture usage
- CI/CD workflow description
- Key design patterns (command registration, feature table processing, coordinate mapping)
- Common development tasks and debugging tips

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

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