bihealth / snappy-pipeline / 21400472484
85%
master: 89%

LAST BUILD BRANCH: 472-adding-neoepitope-prediction-pipeline
DEFAULT BRANCH: master
Ran
Jobs 1
Files 124
Run time 1min
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coverage: 84.683% (+0.3%) from 84.394%
21400472484

Pull #495

github

web-flow 
Merge 0eaad7beb into aeead9154
Pull Request #495: feat: Adding somatic neoepitope preparation workflow

449 of 500 new or added lines in 9 files covered. (89.8%)

105 existing lines in 7 files now uncovered.

10471 of 12365 relevant lines covered (84.68%)

0.85 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
99.38
 snappy_pipeline/workflows/somatic_neoepitope_prediction/model.py
2
92.05
 -0.43% snappy_pipeline/workflows/somatic_variant_annotation/__init__.py
3
81.25
 snappy_pipeline/models/common.py
4
90.0
 snappy_pipeline/workflows/common/samplesheet.py
41
83.4
 snappy_pipeline/workflows/somatic_neoepitope_prediction/__init__.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
97.78
 0.0% snappy_pipeline/workflows/somatic_variant_calling/model.py
3
94.89
 0.0% snappy_pipeline/workflows/hla_typing/__init__.py
6
96.86
 0.0% snappy_pipeline/models/__init__.py
12
92.05
 -0.43% snappy_pipeline/workflows/somatic_variant_annotation/__init__.py
21
76.92
 0.0% snappy_pipeline/workflows/somatic_variant_filtration/model.py
24
86.26
 0.0% snappy_pipeline/workflows/somatic_variant_calling/__init__.py
38
84.3
 0.0% snappy_pipeline/workflows/somatic_variant_filtration/__init__.py
Jobs
ID Job ID Ran Files Coverage
1 21400472484.1 124
84.68
Source Files on build 21400472484