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FAIRmat-NFDI / nomad-parser-plugins-simulation / 21286341839
63%
develop: 66%

Build:
Build:
LAST BUILD BRANCH: rename-annotation.keys
DEFAULT BRANCH: develop
Ran 23 Jan 2026 12:36PM UTC
Jobs 1
Files 77
Run time 1min
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23 Jan 2026 12:17PM UTC coverage: 63.261% (-3.7%) from 66.967%
21286341839

Pull #129

github

ndaelman-hu
Add OUTCAR auxiliary file support for vasprun.xml pseudopotentials

When parsing vasprun.xml, search for OUTCAR in the same directory and extract complete pseudopotential metadata. vasprun.xml lacks detailed POTCAR information (LPAW, LULTRA, LEXCH, cutoffs, SHA256), which are only available in OUTCAR.

Implementation:
- xml_parser.py: Search for OUTCAR auxiliary file after XML parsing
- Manually create `Pseudopotential` instances from parsed OUTCAR data
- Use `OutcarArchiveWriter._process_pseudopotentials()` for post-processing
- Post-processing derives `type` (PAW), `xc_functional` (PBE), and `cutoffs` (ENMAX/ENMIN)

Added to vasp.py:
- `OUTCAR_PSEUDOPOT_KEY` annotation key
- Collection and field-level annotations for pseudopotential properties
Pull Request #129: Add pseudopot parsing

174 of 207 new or added lines in 10 files covered. (84.06%)

416 existing lines in 9 files now uncovered.

4415 of 6979 relevant lines covered (63.26%)

0.63 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
44.89
-0.4% src/nomad_simulation_parsers/parsers/fhiaims/parser.py
14
79.82
-5.37% src/nomad_simulation_parsers/parsers/vasp/xml_parser.py
18
82.26
-1.89% src/nomad_simulation_parsers/parsers/vasp/outcar_parser.py

Uncovered Existing Lines

Lines Coverage ∆ File
6
97.45
-1.46% tests/parsers/test_lammps_parser.py
7
37.69
-1.01% src/nomad_simulation_parsers/parsers/quantumespresso/parser.py
15
46.81
-31.91% src/nomad_simulation_parsers/parsers/quantumespresso/pwscf/parser.py
17
40.63
-52.23% src/nomad_simulation_parsers/schema_packages/utils.py
42
47.33
-17.07% src/nomad_simulation_parsers/parsers/utils/mdparserutils.py
45
65.28
-15.23% src/nomad_simulation_parsers/parsers/lammps/trajectory_parsers.py
57
39.34
-20.96% src/nomad_simulation_parsers/parsers/lammps/file_parsers.py
112
21.79
-59.1% src/nomad_simulation_parsers/parsers/lammps/parser.py
115
35.48
-4.91% src/nomad_simulation_parsers/parsers/utils/mdanalysisparser.py
Jobs
ID Job ID Ran Files Coverage
1 21286341839.1 23 Jan 2026 12:36PM UTC 77
63.26
GitHub Action Run
Source Files on build 21286341839
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  • List 77
  • Changed 21
  • Source Changed 0
  • Coverage Changed 21
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
  • Back to Repo
  • Pull Request #129
  • PR Base - develop (#20136411595)
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