Ran
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Jobs
3
|
Files
42
|
Run time
4min
|
Badge
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README BADGES
|
travis-ci
323 of 323 new or added lines in 19 files covered. (100.0%)
5536 of 7985 relevant lines covered (69.33%)
2.06 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
82.75 |
0.0% | read_utils.py |
1 |
27.78 |
0.0% | tools/snpeff.py |
2 |
35.11 |
0.0% | ncbi.py |
4 |
85.0 |
0.0% | tools/samtools.py |
5 |
55.04 |
0.49% | tools/__init__.py |
5 |
76.12 |
28.36% | util/cmd.py |
6 |
78.17 |
1.31% | util/misc.py |
8 |
83.2 |
0.0% | tools/novoalign.py |
10 |
70.58 |
1.56% | intrahost.py |
15 |
89.6 |
7.73% | metagenomics.py |
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
97.78 |
0.0% | tools/krona.py |
3 |
76.12 |
28.36% | util/cmd.py |
4 |
87.7 |
0.0% | tools/bwa.py |
8 |
78.17 |
1.31% | util/misc.py |
8 |
82.75 |
0.0% | read_utils.py |
11 |
85.0 |
0.0% | tools/samtools.py |
13 |
83.2 |
0.0% | tools/novoalign.py |
20 |
89.6 |
7.73% | metagenomics.py |
25 |
79.73 |
0.0% | tools/picard.py |
32 |
71.49 |
0.0% | illumina.py |
34 |
60.87 |
0.0% | util/file.py |
35 |
35.11 |
0.0% | ncbi.py |
52 |
89.21 |
0.0% | taxon_filter.py |
56 |
89.21 |
8.97% | assembly.py |
89 |
55.04 |
0.49% | tools/__init__.py |
118 |
70.58 |
1.56% | intrahost.py |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|