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Clinical-Genomics / cg / 20817132731
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DEFAULT BRANCH: master
Ran 08 Jan 2026 12:43PM UTC
Jobs 1
Files 886
Run time 1min
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08 Jan 2026 12:40PM UTC coverage: 77.549% (-8.5%) from 86.009%
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Fix(Mutacc) Provide scout instance (#4800) (minor)

## Description
The command `cg upload process-solved` has been crashing since april, see #4798. This is because the command interacts with scout and we now have two scout instances. We use the case_id to determine which instance to use, but case_id is an optional parameter.

This PR adds an option to the CLI command to specify which instance to use.

### Added

- Option to the `cg upload process-solved` command specifying which scout instance to use.

9 of 12 new or added lines in 3 files covered. (75.0%)

5264 of 6788 relevant lines covered (77.55%)

4.15 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
43.75
1.2% cg/cli/upload/mutacc.py
1
57.73
0.0% cg/cli/upload/scout.py
1
78.26
1.79% cg/cli/upload/utils.py
Jobs
ID Job ID Ran Files Coverage
1 20817132731.1 08 Jan 2026 12:43PM UTC 886
86.01
GitHub Action Run
Source Files on build 20817132731
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  • Coverage Changed 2
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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