• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

Clinical-Genomics / cg / 20787265287
86%

Build:
DEFAULT BRANCH: master
Ran 07 Jan 2026 03:53PM UTC
Jobs 1
Files 886
Run time 2min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

07 Jan 2026 03:50PM UTC coverage: 85.987% (+0.3%) from 85.683%
20787265287

push

github

web-flow
Removal of old deprecated code for pipeline starting Pt 1 (#4780)(patch)

## Description
Remove the deprecated code concerning `config_case` from the NextflowAnalysisAPIs

### Changed

- Moved TomteParameters class to the AnalysisStarter module
- Removed old code for nextflow config file creation
- Removed old code for nextflow sample sheet creation
- Removed old code for nextflow params file creator

45 of 48 new or added lines in 13 files covered. (93.75%)

9 existing lines in 4 files now uncovered.

28105 of 32685 relevant lines covered (85.99%)

0.86 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
91.67
-8.33% cg/services/analysis_starter/configurator/file_creators/nextflow/params_file/models.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
92.68
9.35% cg/meta/workflow/tomte.py
2
82.01
-0.48% cg/meta/workflow/analysis.py
2
93.33
-0.28% cg/store/models.py
4
71.05
5.77% cg/meta/workflow/nf_analysis.py
Jobs
ID Job ID Ran Files Coverage
1 20787265287.1 07 Jan 2026 03:53PM UTC 886
85.99
GitHub Action Run
Source Files on build 20787265287
  • Tree
  • List 886
  • Changed 20
  • Source Changed 0
  • Coverage Changed 20
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
  • Back to Repo
  • 9cd143e3 on github
  • Prev Build on master (#20784401706)
  • Next Build on master (#20811624091)
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2026 Coveralls, Inc