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openbraininstitute / neurodamus / 18780202469
90%

Build:
DEFAULT BRANCH: main
Ran 24 Oct 2025 12:54PM UTC
Jobs 4
Files 47
Run time 1min
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24 Oct 2025 12:47PM UTC coverage: 90.389% (-0.2%) from 90.539%
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make neurodamus 0-based (again?) (#391)

## Context

fix #390 

## Scope

remove all the +-1s.

Note: in order to maintain reproducibility for everything that uses a stimulus that is gid-sensitive (a stimulus that uses an rng generator that takes the gid as a seed), I changed these seeds to take the gid + 1 instead. I added a note to expain the +1.

fix `test_conn_manager_syn_stats`. It was expecting 1-based ids while we provide 0-based ones. Results change



## Testing

- all the tests are passing with the old traces
- `check_signal_peaks` threshold in `test_spont_minis_simple` has been lowered to 0.3 because I noticed that it was not getting all the peaks. Anyway, with the old 0.5 the peaks were the same
- added #417 to investigate why my typo did not affect the tests

35 of 49 new or added lines in 10 files covered. (71.43%)

2 existing lines in 2 files now uncovered.

7345 of 8126 relevant lines covered (90.39%)

2.29 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
74.84
-0.79% neurodamus/io/cell_readers.py
12
87.2
-3.28% neurodamus/utils/memory.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
88.5
-0.02% neurodamus/core/configuration.py
1
74.84
-0.79% neurodamus/io/cell_readers.py
Subprojects
ID Flag name Job ID Ran Files Coverage
1 unit 18780202469.1 24 Oct 2025 12:54PM UTC 47
87.93
GitHub Action Run
2 unit-ngv-mpi 18780202469.2 24 Oct 2025 12:54PM UTC 47
55.72
GitHub Action Run
3 unit-mpi 18780202469.3 24 Oct 2025 12:54PM UTC 47
60.4
GitHub Action Run
4 baseline 18780202469.4 24 Oct 2025 12:54PM UTC 47
25.42
GitHub Action Run
Source Files on build 18780202469
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  • List 47
  • Changed 12
  • Source Changed 12
  • Coverage Changed 9
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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