axondeepseg / axondeepseg / 17285963983

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Save raw instance segmentation v2 (#926)

* Update suffixes for instance map and colorized instance seg

* Colorization flag now also saves raw instance map

* Allow 16bit image writing if explicitly specified

* Allow 16bit image reading if specified

* Add tests for instance segmentation (-c flag)

* Improve doc for instance segmentation

* Fix deprication

* Add instance seg to napari window after morph button call

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Co-authored-by: Mathieu Boudreau, PhD <emb6150@gmail.com>

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