rmcar17 / cogent3 / 16431585733
91%

DEFAULT BRANCH: develop
Ran
Jobs 6
Files 174
Run time 1min
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coverage: 90.819% (+0.004%) from 90.815%
16431585733

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Merge pull request #2403 from GavinHuttley/develop

DEV: bump version to 2025.7.10a3

1 of 1 new or added line in 1 file covered. (100.0%)

498 existing lines in 32 files now uncovered.

30123 of 33168 relevant lines covered (90.82%)

5.45 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
94.24
 -0.72% src/cogent3/app/dist.py
1
94.04
 -0.09% src/cogent3/core/location.py
1
95.51
 -0.41% src/cogent3/maths/stats/number.py
3
0.0
 -95.6% src/cogent3/core/new_alignment.py
3
0.0
 -95.03% src/cogent3/core/new_alphabet.py
3
0.0
 -87.58% src/cogent3/core/new_moltype.py
3
0.0
 -92.66% src/cogent3/core/new_sequence.py
4
93.51
 -0.08% src/cogent3/align/progressive.py
4
93.65
 -0.2% src/cogent3/evolve/coevolution.py
5
80.7
 2.27% src/cogent3/align/traceback.py
7
88.31
 0.08% src/cogent3/evolve/distance.py
7
88.3
 -1.24% src/cogent3/evolve/substitution_model.py
7
84.31
 0.31% src/cogent3/parse/gbseq.py
8
93.94
 1.24% src/cogent3/app/translate.py
9
93.37
 -0.03% src/cogent3/evolve/motif_prob_model.py
9
0.0
 -13.64% src/cogent3/format/nexus.py
10
96.05
 0.0% src/cogent3/evolve/likelihood_function.py
13
95.15
 0.86% src/cogent3/app/align.py
13
86.5
 -1.06% src/cogent3/evolve/likelihood_tree.py
13
79.31
 6.41% src/cogent3/evolve/pairwise_distance_numba.py
15
94.82
 -0.11% src/cogent3/app/sample.py
17
94.02
 0.07% src/cogent3/util/dict_array.py
20
85.57
 0.03% src/cogent3/format/table.py
21
95.14
 -0.09% src/cogent3/app/data_store.py
21
81.97
 2.44% src/cogent3/__init__.py
23
94.92
 -0.02% src/cogent3/evolve/fast_distance.py
24
92.96
 -1.92% src/cogent3/app/io.py
24
86.13
 -2.35% src/cogent3/parse/fasta.py
40
91.95
 -1.29% src/cogent3/util/misc.py
52
95.26
 0.07% src/cogent3/core/tree.py
55
83.95
 0.08% src/cogent3/align/pairwise.py
62
93.96
 -0.05% src/cogent3/core/table.py
Jobs
ID Job ID Ran Files Coverage
1 run-3.10-windows-latest - 16431585733.1 174
90.8
 GitHub Action Run
2 run-3.13-windows-latest - 16431585733.2 174
90.79
 GitHub Action Run
3 run-3.13-macos-latest - 16431585733.3 174
90.79
 GitHub Action Run
4 run-3.10-macos-latest - 16431585733.4 174
90.8
 GitHub Action Run
5 run-3.10-ubuntu-latest - 16431585733.5 174
90.79
 GitHub Action Run
6 run-3.13-ubuntu-latest - 16431585733.6 174
90.78
 GitHub Action Run
Source Files on build 16431585733