MHKiT-Software / MHKiT-Python / 16302767208

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Modernize Package Configuration (#400)

This PR modernizes the package configuration by migrating from
`setup.py` to `pyproject.toml` and adds a new optional dependency group
for examples. It also includes various code improvements and CI workflow
updates.

- Migrated from `setup.py` to `pyproject.toml` for modern Python
packaging
- Removed `requirements.txt` in favor of `pyproject.toml` dependency
management
- Added new optional dependency groups for pip installs: E.g:
  - `examples`: Includes all dependencies needed for running examples
  - `all`: Includes all module dependencies
  - Individual module groups (wave, tidal, river, etc.)
- Updated GitHub Actions workflows to use `pip install -e ".[all, dev]"`
instead of `pip install -e .`

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Co-authored-by: Andrew Simms <andrew.simms@nrel.gov>
Co-authored-by: akeeste <akeeste@sandia.gov>

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