Clinical-Genomics / cg / 15726616615

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push

github

Create ticket inbox before rsync job (#4446)(patch)

### Added

* <TICKET>_create_inbox job creates the directory using mkdir -p which will not fail should the directory already exist
* <CASE_ID>_rsync job depends on the above job using the sbatch parameter --dependency=afterok:<JOB_ID> and so will not run before it's completed.

### Changed

If the optional header --exclude is not included there will no longer be an empty #SBATCH header

### Fixed

This will mean that the directory already exists when rsync runs and hopefully there will not be any more race conditions when running those jobs.

43 of 43 new or added lines in 6 files covered. (100.0%)

26723 of 31137 relevant lines covered (85.82%)

0.86 hits per line