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Clinical-Genomics / cg / 14878327700
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DEFAULT BRANCH: master
Ran 07 May 2025 08:07AM UTC
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Files 834
Run time 1min
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07 May 2025 08:05AM UTC coverage: 85.69% (+0.02%) from 85.668%
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Add support for raredisease orders (#4363)(minor)

## Description
Adds validation and storing support to Raredisease orders. Uses all existing validation from MIP-DNA plus an additional validation that checks that all samples in a case have app tags belonging to the same prep category.

### Added

- New case validation rule `validate_samples_in_case_have_same_prep_category` for Raredisease and MIP-DNA
- Utils function to get prep categories for samples of a case
- Error model for multiple samples in a case having same prep category
- Models for the validation of raredisease orders inheriting from MIP:
  - Order (fixing type hints for cases)
  - Case (fixing type hints for sample and for methods
  - Sample
- Allowed Raredisease delivery types
- Validation rules
- Entry for Raredisease to Storing registry

70 of 73 new or added lines in 11 files covered. (95.89%)

26606 of 31049 relevant lines covered (85.69%)

0.86 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
87.72
-3.59% cg/services/orders/validation/rules/case/utils.py
Jobs
ID Job ID Ran Files Coverage
1 14878327700.1 07 May 2025 08:07AM UTC 834
85.69
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