Clinical-Genomics / cg / 14706532168

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github

RAREDISEASE & nf-analysis: change logic for skip_germlinevariant calling in config-case (#4330)

### Added

- Error throwing when a parameter is defined both in the servers yaml and built from cg

### Changed

- change logic for skip_germlinevariant calling in config-case
- the default capture kit will be defined from servers configs, not cg

6 of 7 new or added lines in 2 files covered. (85.71%)

21132 of 25214 relevant lines covered (83.81%)

1.05 hits per line