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NeuralEnsemble / elephant / 309
88%

Build:
DEFAULT BRANCH: master
Ran 05 Aug 2016 02:25PM UTC
Jobs 5
Files 38
Run time 77min
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alperyeg
Fixes import elephant after install, default spatial filter applied as convolution, cleanup (#94)

* added standard and inverse methods for current source density estimates for 1D laminar electrodes

removed 'elephant.icsd' from packages entry

removed commented out line

fixed botched unittests

python3 fix, no global matplotlib import

removed elephant.csd.test function, moved test module to test folder

2to3 apparently changed file endings?

redid how exceptions are raises for backwards comp with older python versions

Workaround for quantities issues with some numpy arrays

Handle zero length, unsize object spike train issue arising in Neo

Workaround for np.allclose support in some versions of numpy

Added warning about unsized SpikeTrain objects

file encoding, patch for unit 'siemens' for outdated quantities modules

* new license will be BSD-based (see /opt/local/bin:/opt/local/sbin:/opt/local/bin:/opt/local/sbin:/nest/bin/:/Applications/NEURON-7.4/nrn/x86_64/bin/:/opt/local/bin:/opt/local/sbin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/TeX/texbin/TO/elephant/LICENSE.txt

* removed references to GPL license

* some reformatting, test_icsd.py pass locally on 2.7 and 3.4

* 1-pass spatial filter implemented using ss.convolve

* fixes icsd python files not being copied when installing using 'python setup.py install'

* removed trailing whitespaces

13 of 13 new or added lines in 1 file covered. (100.0%)

7762 of 8629 relevant lines covered (89.95%)

3.73 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
12
100.0
elephant/icsd/icsd.py
Jobs
ID Job ID Ran Files Coverage
1 309.1 (DISTRIB="conda" PYTHON_VERSION="2.7" INSTALL_MKL="true" NUMPY_VERSION="1.10.4" SCIPY_VERSION="0.16.1" PANDAS_VERSION="0.16.2" COVERAGE="true") 05 Aug 2016 03:40PM UTC 0
89.77
Travis Job 309.1
2 309.2 (DISTRIB="conda" PYTHON_VERSION="3.5" INSTALL_MKL="true" NUMPY_VERSION="1.10.4" SCIPY_VERSION="0.16.1" PANDAS_VERSION="0.16.2" COVERAGE="true") 05 Aug 2016 03:42PM UTC 0
89.8
Travis Job 309.2
3 309.3 (DISTRIB="conda_min" PYTHON_VERSION="2.7" INSTALL_MKL="false" NUMPY_VERSION="1.8.2" SCIPY_VERSION="0.14.0" COVERAGE="true") 05 Aug 2016 03:38PM UTC 0
64.48
Travis Job 309.3
4 309.4 (DISTRIB="conda_min" PYTHON_VERSION="3.4" INSTALL_MKL="false" NUMPY_VERSION="1.8.2" SCIPY_VERSION="0.14.0" COVERAGE="true") 05 Aug 2016 03:40PM UTC 0
64.49
Travis Job 309.4
5 309.5 (DISTRIB="ubuntu" PYTHON_VERSION="2.7" INSTALL_ATLAS="true" NUMPY_VERSION="1.8.2" SCIPY_VERSION="0.14.0" COVERAGE="true") 05 Aug 2016 03:30PM UTC 0
64.48
Travis Job 309.5
Source Files on build 309
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