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fix: avoid shadowing of 'err' in CLI options, YAML store, and external plugin helpers

Replaced short variable declarations with assignments in pkg/cli/options.go,
pkg/config/store/yaml/store.go, and pkg/plugins/external/helpers.go to avoid shadowing
the outer 'err' variable. These changes improve error traceability and follow Go best
practices for scoped variable reuse and readability.