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openbraininstitute / neurodamus / 13765059027
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DEFAULT BRANCH: main
Ran 10 Mar 2025 12:49PM UTC
Jobs 2
Files 48
Run time 19min
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10 Mar 2025 12:49PM UTC coverage: 63.444% (+0.4%) from 63.061%
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`spont_minis` simple test (#124)

## Context

`spont_minis` uses a stochastic process to generate events. Synapses, if
ready, release generating a voltage change.

## Scope
Proper testing of this requires a stochastic test campaign that is out
of the scope of this PR.

Here I just want to see that I see a voltage change in `RingB` if there
is a `spont_minis` attached. Without the `spont_minis` no peaks are
recorded. Thus, checking the precise position of the peaks for this
`spont_minis` should be sufficient as reproducing this randomly or from
other sources is very unlikely.

I am also testing that a pont minis is attached to the synapse and that
in the weight it really serves its type as spont_minis

- [x] remove accidental debug code that remained around

## Fix

#114 only partially,


## Additional bug fixes

#123 while working on this we noticed that `sim_init` can be called
twice (it has protection) but `init` does not. I added the same
protection to `init` too.

## Review
* [ ] PR description is complete
* [ ] Coding style (imports, function length, New functions, classes or
files) are good
* [ ] Unit/Scientific test added
* [ ] Updated Readme, in-code, developer documentation

3 of 7 new or added lines in 2 files covered. (42.86%)

523 existing lines in 3 files now uncovered.

5729 of 9030 relevant lines covered (63.44%)

0.87 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
72.77
8.23% neurodamus/connection.py
2
58.09
-0.03% neurodamus/node.py

Uncovered Existing Lines

Lines Coverage ∆ File
73
23.42
-46.2% neurodamus/core/coreneuron_configuration.py
92
31.65
-42.2% neurodamus/core/cell.py
358
30.06
-46.19% neurodamus/core/configuration.py
Subprojects
ID Flag name Job ID Ran Files Coverage
1 baseline 13765059027.1 10 Mar 2025 12:49PM UTC 48
24.29
GitHub Action Run
2 unit 13765059027.2 10 Mar 2025 12:50PM UTC 48
63.06
GitHub Action Run
Source Files on build 13765059027
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