sequana / sequana / 13577274425
68%
master: 70%

LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Ran
Jobs 3
Files 181
Run time 1min
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coverage: 69.722% (-2.1%) from 71.796%
13577274425

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Merge pull request #866 from cokelaer/dev

various update including variant plots

74 of 390 new or added lines in 16 files covered. (18.97%)

219 existing lines in 12 files now uncovered.

14127 of 20262 relevant lines covered (69.72%)

2.09 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
0.0
 0.0% sequana/multiqc/isoseq.py
1
0.0
 0.0% sequana/multiqc/isoseq_qc.py
1
0.0
 0.0% sequana/multiqc/laa.py
1
0.0
 0.0% sequana/multiqc/pacbio_amplicon.py
2
92.78
 -0.18% sequana/bedtools.py
4
94.26
 2.86% sequana/fasta.py
8
74.6
 -5.88% sequana/modules_report/variant_calling.py
8
79.82
 -2.71% sequana/variants.py
47
75.68
 -11.78% sequana/gff3.py
243
0.0
 sequana/multiqc/pairtools.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
78.17
 -0.29% sequana/mixture.py
1
90.68
 0.0% sequana/multiqc/bamtools_stats.py
1
78.74
 -0.12% sequana/pacbio.py
1
0.0
 0.0% sequana/somy.py
2
0.0
 0.0% sequana/kozak.py
2
11.37
 -0.11% sequana/kraken/consensus.py
3
86.96
 -13.04% sequana/enrichment/gsea.py
4
48.85
 -2.68% sequana/enrichment/plot_go_terms.py
9
49.08
 -4.29% sequana/kraken/sequential.py
12
57.26
 -2.56% sequana/kraken/analysis.py
28
58.87
 -19.71% sequana/enrichment/uniprot_enrichment.py
155
36.66
 -44.52% sequana/enrichment/kegg.py
Jobs
ID Job ID Ran Files Coverage
1 13577274425.1 181
69.72
2 13577274425.2 181
69.72
3 13577274425.3 181
69.72
Source Files on build 13577274425