griffithlab / pVACtools / 13393614980
86%
master: 84%

LAST BUILD BRANCH: 7.0.0_bugfixes
DEFAULT BRANCH: master
Ran
Jobs 5
Files 137
Run time 2min
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coverage: 83.006% (-0.5%) from 83.463%
13393614980

Pull #1203

github

web-flow 
Merge 4ca77dac7 into e899319d0
Pull Request #1203: Integrated pVACcompare into pVACtools

422 of 588 new or added lines in 19 files covered. (71.77%)

88 existing lines in 12 files now uncovered.

7864 of 9474 relevant lines covered (83.01%)

4.14 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
96.3
 pvactools/tools/pvaccompare/comparisons/compare_aggregated_tsv.py
2
90.91
 pvactools/tools/pvaccompare/runners/run_compare_aggregated_tsv.py
2
83.33
 pvactools/tools/pvaccompare/runners/run_compare_json.py
2
91.67
 pvactools/tools/pvaccompare/runners/run_compare_reference_matches_tsv.py
2
90.0
 pvactools/tools/pvaccompare/runners/run_compare_unaggregated_tsv.py
4
88.57
 pvactools/tools/pvaccompare/comparisons/compare_reference_matches_tsv.py
4
75.0
 pvactools/tools/pvaccompare/runners/run_compare_yml.py
9
84.21
 pvactools/tools/pvaccompare/comparisons/compare_yml.py
9
93.88
 pvactools/tools/pvaccompare/run_utils.py
12
20.0
 pvactools/tools/pvaccompare/compare_tools/validators.py
18
25.0
 pvactools/tools/pvaccompare/server.py
27
51.79
 pvactools/tools/compare.py
74
8.64
 pvactools/tools/pvaccompare/compare_tools/comparison_router.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.0
 0.17% pvactools/tools/pvacbind/generate_aggregated_report.py
1
96.3
 0.14% pvactools/tools/pvacfuse/generate_aggregated_report.py
1
96.97
 0.09% pvactools/tools/pvacseq/generate_aggregated_report.py
1
96.67
 0.11% pvactools/tools/pvacsplice/generate_aggregated_report.py
5
91.67
 0.0% pvactools/lib/post_processor.py
5
83.5
 0.0% pvactools/tools/pvacbind/run.py
5
79.82
 0.0% pvactools/tools/pvacseq/run.py
6
83.8
 0.0% pvactools/tools/pvacfuse/run.py
6
85.37
 0.0% pvactools/tools/pvacsplice/run.py
9
74.14
 -1.79% pvactools/lib/allele_specific_binding_filter.py
17
94.92
 2.93% pvactools/lib/aggregate_all_epitopes.py
31
84.75
 -0.31% pvactools/tools/pvacvector/run.py
Jobs
ID Job ID Ran Files Coverage
1 13393614980.1 137
82.99
 GitHub Action Run
2 13393614980.2 137
82.76
3 13393614980.3 137
82.86
 GitHub Action Run
4 13393614980.4 137
82.86
 GitHub Action Run
5 13393614980.5 137
82.9
 GitHub Action Run
Source Files on build 13393614980