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uc-cdis / cohort-middleware / 13269584591
82%

Build:
DEFAULT BRANCH: master
Ran 11 Feb 2025 06:12PM UTC
Jobs 1
Files 29
Run time 384min
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11 Feb 2025 06:10PM UTC coverage: 82.268% (-0.3%) from 82.571%
13269584591

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Feat: support filters and transformation (#125)

feat: add new support for filters and transformation arguments in histogram endpoint

* fix: fix the naming for concept lists
...from ids to definitions (defs) and add some parsing for the new filter entries
in request body

* feat: working histogram endpoint POC for using tmp table for transformations

* feat: added first log transformation

* feat: added z-score transformation

* feat: add tempttablecache to include cleanup of oldest / least accessed item

* tmp: temporarily disable strict validation until frontend is fixed

* feat: add new ToSQL wrapper method

* feat: remove histogramConceptId from histogram endpoint
...and expect it as part of the variables instead

* fix: make sure only postgresql and sqlserver are accepted for now

* fix: naming improvements and extra unit tests

* fix: improve coverage of parsing.go

* feat: improve coverage of TempTableCache

* feat: improve coverage of TableExists

356 of 428 new or added lines in 10 files covered. (83.18%)

13 existing lines in 3 files now uncovered.

2343 of 2848 relevant lines covered (82.27%)

29.93 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
87.25
-0.32% controllers/cohortdata.go
1
0.0
0.0% server/router.go
1
95.45
-4.55% utils/dsn.go
6
96.13
-3.2% models/cohortdata.go
12
77.36
utils/temptablecache.go
18
85.67
-1.79% utils/parsing.go
33
85.59
-14.41% models/helper.go

Uncovered Existing Lines

Lines Coverage ∆ File
1
85.59
-14.41% models/helper.go
5
66.2
0.0% controllers/concept.go
7
85.67
-1.79% utils/parsing.go
Jobs
ID Job ID Ran Files Coverage
1 13269584591.1 11 Feb 2025 06:12PM UTC 29
82.27
GitHub Action Run
Source Files on build 13269584591
  • Tree
  • List 29
  • Changed 12
  • Source Changed 0
  • Coverage Changed 8
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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