cogent3 / ensembl_tui / 12798904678
90%

DEFAULT BRANCH: develop
Ran
Jobs 9
Files 132
Run time 1min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
coverage: 80.827% (-0.2%) from 80.991%
12798904678

push

github

web-flow 
Merge pull request #177 from GavinHuttley/mysql-parquet

Convert alignment lookup storage to duckdb and parquet from sqlite3

14898 of 18432 relevant lines covered (80.83%)

1.27 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
3
93.62
 -1.12% .nox/test-3-12/Lib/site-packages/ensembl_tui/_maf.py
3
93.62
 -1.12% .nox/test-3-10/Lib/site-packages/ensembl_tui/_maf.py
3
93.62
 -1.12% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_maf.py
3
93.62
 -1.12% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_maf.py
3
93.62
 -1.12% .nox/test-3-11/Lib/site-packages/ensembl_tui/_maf.py
3
93.62
 -1.12% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_maf.py
6
95.21
 -0.03% .nox/test-3-11/Lib/site-packages/ensembl_tui/_mysql_core_attr.py
6
95.21
 -0.03% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_mysql_core_attr.py
6
95.21
 -0.03% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_mysql_core_attr.py
6
95.21
 -0.03% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_mysql_core_attr.py
6
95.21
 -0.03% .nox/test-3-12/Lib/site-packages/ensembl_tui/_mysql_core_attr.py
6
95.21
 -0.03% .nox/test-3-10/Lib/site-packages/ensembl_tui/_mysql_core_attr.py
7
91.95
 20.53% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_install.py
7
91.95
 20.53% .nox/test-3-12/Lib/site-packages/ensembl_tui/_install.py
7
91.95
 20.53% .nox/test-3-11/Lib/site-packages/ensembl_tui/_install.py
7
91.95
 20.53% .nox/test-3-10/Lib/site-packages/ensembl_tui/_install.py
7
91.95
 20.53% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_install.py
7
91.95
 20.53% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_install.py
8
93.39
 2.91% .nox/test-3-10/Lib/site-packages/ensembl_tui/_homology.py
8
93.39
 2.91% .nox/test-3-12/Lib/site-packages/ensembl_tui/_homology.py
8
93.39
 2.91% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_homology.py
8
93.39
 2.91% .nox/test-3-11/Lib/site-packages/ensembl_tui/_homology.py
8
93.39
 2.91% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_homology.py
8
93.39
 2.91% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_homology.py
11
88.89
 -5.85% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_storage_mixin.py
11
88.89
 -5.85% .nox/test-3-11/Lib/site-packages/ensembl_tui/_storage_mixin.py
11
88.89
 -5.85% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_storage_mixin.py
11
88.89
 -5.85% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_storage_mixin.py
11
88.89
 -5.85% .nox/test-3-10/Lib/site-packages/ensembl_tui/_storage_mixin.py
11
88.89
 -5.85% .nox/test-3-12/Lib/site-packages/ensembl_tui/_storage_mixin.py
16
91.84
 1.5% .nox/test-3-10/Lib/site-packages/ensembl_tui/_align.py
16
91.84
 1.5% .nox/test-3-11/Lib/site-packages/ensembl_tui/_align.py
16
91.84
 1.5% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_align.py
16
91.84
 1.5% .nox/test-3-12/Lib/site-packages/ensembl_tui/_align.py
16
91.84
 1.5% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_align.py
16
91.84
 1.5% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_align.py
35
74.53
 -17.77% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_ingest_annotation.py
39
87.11
 1.5% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_annotation.py
39
87.11
 1.5% .nox/test-3-12/lib/python3.12/site-packages/ensembl_tui/_annotation.py
39
87.11
 1.5% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_annotation.py
39
87.11
 1.5% .nox/test-3-10/Lib/site-packages/ensembl_tui/_annotation.py
39
87.11
 1.5% .nox/test-3-11/Lib/site-packages/ensembl_tui/_annotation.py
39
87.11
 1.5% .nox/test-3-12/Lib/site-packages/ensembl_tui/_annotation.py
41
62.11
 -14.81% .nox/test-3-11/Lib/site-packages/ensembl_tui/_ingest_annotation.py
41
62.11
 -14.81% .nox/test-3-10/lib/python3.10/site-packages/ensembl_tui/_ingest_annotation.py
41
62.11
 -14.81% .nox/test-3-11/lib/python3.11/site-packages/ensembl_tui/_ingest_annotation.py
41
62.11
 -14.81% .nox/test-3-10/Lib/site-packages/ensembl_tui/_ingest_annotation.py
41
62.11
 -14.81% .nox/test-3-12/Lib/site-packages/ensembl_tui/_ingest_annotation.py
Jobs
ID Job ID Ran Files Coverage
1 run-3.11-ubuntu-latest - 12798904678.1 22
79.59
 GitHub Action Run
2 run-3.10-macos-latest - 12798904678.2 22
79.59
 GitHub Action Run
3 run-3.12-windows-latest - 12798904678.3 22
79.59
 GitHub Action Run
4 run-3.12-macos-latest - 12798904678.4 22
79.59
 GitHub Action Run
5 run-3.11-macos-latest - 12798904678.5 22
79.59
 GitHub Action Run
6 run-3.10-ubuntu-latest - 12798904678.6 22
79.59
 GitHub Action Run
7 run-3.10-windows-latest - 12798904678.7 22
79.59
 GitHub Action Run
8 run-3.12-ubuntu-latest - 12798904678.8 22
87.01
 GitHub Action Run
9 run-3.11-windows-latest - 12798904678.9 22
79.59
 GitHub Action Run
Source Files on build 12798904678