biocore / mg-scripts / 12583442245
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Jobs 1
Files 30
Run time 1min
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coverage: 79.262% (-1.1%) from 80.314%
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Updates based on testing (#160)

* Updates based on testing

* flake8

* ignore row order on dataframe comparison

* Resolve differences in test results

* Add Antonio's recent changes

* Updates based on feedback

* SeqCountsJob now uses TRIntegratedJob output

680 of 1108 branches covered (61.37%)

Branch coverage included in aggregate %.

126 of 183 new or added lines in 10 files covered. (68.85%)

5 existing lines in 2 files now uncovered.

2756 of 3227 relevant lines covered (85.4%)

0.85 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
4
79.74
 7.86% sequence_processing_pipeline/SeqCountsJob.py
6
81.9
 -6.67% sequence_processing_pipeline/Commands.py
15
61.48
 -0.92% sequence_processing_pipeline/GenPrepFileJob.py
16
56.9
 -18.1% sequence_processing_pipeline/TRIntegrateJob.py
16
57.14
 -19.78% sequence_processing_pipeline/TellReadJob.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
56.9
 -18.1% sequence_processing_pipeline/TRIntegrateJob.py
4
93.49
 -1.18% sequence_processing_pipeline/tests/test_Job.py
Jobs
ID Job ID Ran Files Coverage
1 Unit Test - 12583442245.1 30
79.26
Source Files on build 12583442245