TuringLang / AbstractMCMC.jl / 11179606134

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Addition of `step_warmup` (#117)

* added step_warmup which is can be overloaded when convenient

* added step_warmup to docs

* Update src/interface.jl

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* introduce new kwarg `num_warmup` to `sample` which uses `step_warmup`

* updated docs

* allow combination of discard_initial and num_warmup

* added docstring for mcmcsample

* Apply suggestions from code review

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* Apply suggestions from code review

Co-authored-by: David Widmann <devmotion@users.noreply.github.com>

* Update src/sample.jl

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* removed docstring and deferred description of keyword arguments to the docs

* Update src/sample.jl

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* Update src/sample.jl

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* added num_warmup to common keyword arguments docs

* also allow step_warmup for the initial step

* simplify logic for discarding fffinitial samples

* Apply suggestions from code review

Co-authored-by: David Widmann <devmotion@users.noreply.github.com>

* also report progress for the discarded samples

* Apply suggestions from code review

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* move progress-report to end of for-loop for discard samples

* move step_warmup to the inner while loops too

* Update src/sample.jl

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* Apply suggestions from code review

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* reverted to for-loop

* Update src/sample.jl

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42 of 53 new or added lines in 2 files covered. (79.25%)

338 of 358 relevant lines covered (94.41%)

3992310.93 hits per line