NBISweden / AGAT / 10774923099

70%

Build Type

push

github

Committed by web-flow

Commit Message

Mfannot - big improvement in handling this conversion (#483)

* add group_ii_intron and orf in feature_levels.yaml

* fix MFannot #455 + add a new test to be sure feature from mfannot start at 1
* rewrite most of the script to use omniscient and better define features
* Fix case in checkSequential in OmniscientI where no L1 and l2 defined after L3.
* add sort for input hash In OmniscientI to preserve reproducibility

Run Details

183 of 211 new or added lines in 3 files covered. (86.73%)

3 existing lines in 2 files now uncovered.

12271 of 15156 relevant lines covered (80.96%)

2125.96 hits per line