10721806520
94%
main: 94%

Ran 05 Sep 2024 01:57PM UTC

Jobs 1

Files 8

Run time 1min

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Committed 05 Sep 2024 01:53PM UTC coverage: 94.238% (+0.2%) from 94.061%

Build # 10721806520

Build Type

push

github

Committed by

web-flow

Commit Message

generate_codon_frq_CFmethod (#144)

- defined the method generate_codon_frq in ComputeFeatures class to
populate class variables codon_counts and codon_frqs with dictionaries
representing codon bias of each virus and host
- imported gene_features functionality for incorporation
- defined pytest for generate_codon_frq
- after approval, I'll model this format when defining functions for
RSCU, aa_freq, etc, and the populated class variables from these methods
will then be compared between virus-host Pairs in the compute_features
method

Run Details

507 of 538 relevant lines covered (94.24%)

1.88 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	10721806520.1	05 Sep 2024 01:57PM UTC	0	94.24	GitHub Action Run

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DuhaimeLab / VirusHostInteractionPredictor / 10721806520
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