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Clinical-Genomics / cg / 9500832355
86%

Build:
DEFAULT BRANCH: master
Ran 13 Jun 2024 01:47PM UTC
Jobs 1
Files 563
Run time 1min
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13 Jun 2024 01:45PM UTC coverage: 84.687% (+0.02%) from 84.668%
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Add Illumina models filter function to CRUD (#3333)(patch)

## Description

#3325 requires filter store filter functions for IlluminaSampleSequencingMetrics and IlluminaSequencingRun. Testing these functions requires the creation of several fixtures and helper functions and therefore, I decided to create a PR only for the creation of the filter function and its complete testing

### Added

- Functions to filter IlluminaSampleSequencingMetrics by run id, sample internal id and lane (filter function and in CRUD)
- Functions to filter IlluminaSequencingRun by run id (filter function and in CRUD)
- Fixture `store_with_illumina_sequencing_data`
- Store helper functions to add and ensure IlluminaFlowCells, IlluminaSequencingRuns and IlluminaSampleSequencingMetrics

### Changed

- Test for IlluminaFlowCell filters to use correct store fixture
- Illumina post-processing tests
- Functions to store IlluminaSampleSequencingMetrics in post-processing service and CRUD, to align more with SRP

56 of 56 new or added lines in 6 files covered. (100.0%)

20452 of 24150 relevant lines covered (84.69%)

0.85 hits per line

Jobs
ID Job ID Ran Files Coverage
1 9500832355.1 13 Jun 2024 01:47PM UTC 0
84.69
Source Files on build 9500832355
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