Clinical-Genomics / cg / 8690050388

86%

Build Type

push

github

Committed by web-flow

Commit Message

Remove bcl2fastq sample sheet validation (#3111)(patch)

Removes bcl_convert parameter for all sample sheet validation commands. This means all sample sheet validation is now BCConvert and will fail with BCL2FASTQ sample sheets.

### Changed

- Removed methods `_validate_bcl2fastq` and `_validate_sample_sheet_is_correct_type` of class `SampleSheetValidator`
- Removed method `_validate_bcl_convert` method, included its logic in `validate_sample_sheet_from_content`.
- Removed tests

Run Details

20 of 20 new or added lines in 3 files covered. (100.0%)

8 existing lines in 4 files now uncovered.

19706 of 23274 relevant lines covered (84.67%)

0.85 hits per line