angelolab / ark-analysis / 8620036927

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master: 94%

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Commit Message

Manual mask names (#1126)

* mask_types arg and remove nuclear mask rows

* docstring fix

* Updated ez_seg notebook to include mask_types variable at cell table generation.

* cell table test fix

* why do we even still have these mibitiff functions

* fix mask names in nb

* aesthetics

* Updated ez nb to match new example dataset.

* Added updates to nb that weren't pushed last time.

* updated tests for new ezseg changes

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Co-authored-by: bryjc <bryjcannon@gmail.com>
Co-authored-by: Sricharan Reddy Varra <srivarra@stanford.edu>
Co-authored-by: Sricharan Reddy Varra <sricharanvarra@gmail.com>

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