NBISweden / AGAT / 8377556353

81%

master: 81%

Build Type

push

github

Committed by web-flow

Commit Message

fix #441 use L3 feature instead to L1 as template to create features when transcript_id exists (#442)

* use L3  feature as template instead of L1 to be able to use proper transcript_id when converting to GTF

* when using clean_clone with clean_attributes, remove Parent and transcript_id attributes anyway when it is a level1 feature

* adapt tests and add test for issue 441

*  Optimize first test in "_check_l2_linked_to_l3" to see if an L1 feature already exists (check among all tags)

Run Details

44 of 48 new or added lines in 2 files covered. (91.67%)

1 existing line in 1 file now uncovered.

12192 of 15043 relevant lines covered (81.05%)

2124.32 hits per line