angelolab / ark-analysis / 8058236298

95%

master: 94%

push

github

Don't generate duplicate `cluster_id` columns if `generate_and_save_cluster_masks` run twice (#1110)

* Ensure cluster_id column isn't created twice if re-run

* Add debugging statements to try and pinpoint issue with column ordering

* Also add print statements to see how the CI cache_dir is being affected

* Add more print statements

* More print statements and debugging debugging (if that makes sense)

* Even more print statements

* added ez_seg_data in scripts/get_example_dataset.py

* Track down that norm_data!

* Add a few more assert statements to check

* Did the columns get reordered?

* Adjust test

* Update print statements and remove assertion so we get further

* Fix tests for FOV removed

* PYCODESTYLE import fix

* Remove unnecessary print statements

* adjusted testing adata fixture

---------

Co-authored-by: Sricharan Reddy Varra <sricharanvarra@gmail.com>

2110 of 2369 branches covered (89.07%)

Branch coverage included in aggregate %.

4059 of 4234 relevant lines covered (95.87%)

5.72 hits per line