griffithlab / pVACtools / 7617276535
83%
master: 83%

LAST BUILD BRANCH: pvacvector
DEFAULT BRANCH: master
Ran
Jobs 5
Files 101
Run time 10s
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coverage: 77.077% (-5.8%) from 82.828%
7617276535

Pull #911

github

web-flow 
Merge 57c38fff7 into b74da8797
Pull Request #911: Add new pVACsplice tool

442 of 1107 new or added lines in 30 files covered. (39.93%)

4 existing lines in 2 files now uncovered.

6197 of 8040 relevant lines covered (77.08%)

3.84 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
85.71
 0.42% pvactools/lib/call_iedb.py
1
97.92
 pvactools/lib/filter_regtools_results.py
1
83.33
 -0.51% pvactools/tools/pvacbind/run.py
1
83.71
 -0.29% pvactools/tools/pvacfuse/run.py
1
79.65
 -0.35% pvactools/tools/pvacseq/run.py
2
84.76
 0.0% pvactools/lib/calculate_reference_proteome_similarity.py
2
95.12
 pvactools/lib/combine_inputs.py
2
90.91
 pvactools/lib/load_gtf_data.py
2
0.0
 pvactools/tools/pvacsplice/__init__.py
5
94.05
 pvactools/lib/fasta_to_kmers.py
5
84.38
 -15.63% pvactools/lib/sort.py
7
79.51
 -0.15% pvactools/tools/pvacvector/run.py
10
0.0
 pvactools/lib/load_ensembl_data.py
11
86.03
 -5.58% pvactools/lib/post_processor.py
11
87.83
 -12.17% pvactools/lib/run_argument_parser.py
14
85.44
 -2.06% pvactools/lib/pipeline.py
14
0.0
 pvactools/tools/pvacsplice/gtf_to_tsv.py
16
86.38
 -2.18% pvactools/lib/aggregate_all_epitopes.py
23
76.65
 -3.51% pvactools/lib/prediction_class.py
23
81.95
 -8.0% pvactools/lib/top_score_filter.py
25
0.0
 pvactools/tools/pvacsplice/main.py
26
80.3
 pvactools/lib/junction_to_fasta.py
27
0.0
 pvactools/lib/print_log.py
68
83.61
 -6.45% pvactools/lib/output_parser.py
97
72.55
 -14.51% pvactools/lib/input_file_converter.py
129
0.0
 pvactools/lib/splice_pipeline.py
141
0.0
 pvactools/tools/pvacsplice/run.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
81.95
 -8.0% pvactools/lib/top_score_filter.py
3
87.83
 -12.17% pvactools/lib/run_argument_parser.py
Jobs
ID Job ID Ran Files Coverage
1 7617276535.1 101
76.98
2 7617276535.2 101
76.75
3 7617276535.3 101
76.95
4 7617276535.4 101
77.04
5 7617276535.5 101
76.98
Source Files on build 7617276535