7164468116

Committed 11 Dec 2023 07:57AM UTC coverage: 56.776% (-0.02%) from 56.794%

Build # 7164468116

Build Type

push

github

Committed by

web-flow

Commit Message

Implement first pass at platform export tool (#1672)

* Implement first pass at platform export tool

* Remove dead code, add progress report

* Syntax fix

* Note command addition in CHANGELOG

* ignore certain dqe types

---------

Co-authored-by: James A Sutherland <>
Co-authored-by: James Friel <JFriel001@dundee.ac.uk>

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/Rdmp.Core/CommandExecution/AtomicCommands/ExecuteCommandExportDatabaseToDir.cs

// Copyright (c) The University of Dundee 2018-2023
// This file is part of the Research Data Management Platform (RDMP).
// RDMP is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
// RDMP is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
// You should have received a copy of the GNU General Public License along with RDMP. If not, see <https://www.gnu.org/licenses/>.

using System;
using System.Collections.Generic;
using System.IO;
using System.Linq;
using System.Linq.Expressions;
using Rdmp.Core.Curation.Data;
using Rdmp.Core.Repositories;

namespace Rdmp.Core.CommandExecution.AtomicCommands;

// Dump all compatible objects from the current platform database(s) into a
// YAML/JSON directory for SQL-free operation.
public class ExecuteCommandExportDatabaseToDir : BasicCommandExecution
{
    private readonly IBasicActivateItems _activator;
    private readonly DirectoryInfo _target;

    public ExecuteCommandExportDatabaseToDir(IBasicActivateItems activator, [DemandsInitialization("Where the platform directory should be created")] string target)
    {
        _target = new DirectoryInfo(target);
        _activator = activator;
    }

    private readonly List<string> ignoreList = new() { "Rdmp.Core.DataQualityEngine.Data.DQEGraphAnnotation", "Rdmp.Core.DataQualityEngine.Data.Evaluation" };

    public override void Execute()
    {
        base.Execute();
        var repo = new YamlRepository(_target);
        foreach (var t in repo.GetCompatibleTypes())
        {
            if (ignoreList.Contains(t.FullName)) continue;
            try
            {
                Console.WriteLine(t.FullName);
                foreach (var o in _activator.GetRepositoryFor(t).GetAllObjects(t))
                    repo.SaveToDatabase(o);
            }
            catch(Exception)
            {
                Console.WriteLine($"Unable to find repo for {t.FullName}");
            }

        }
    }
}

1	// Copyright (c) The University of Dundee 2018-2023
2	// This file is part of the Research Data Management Platform (RDMP).
3	// RDMP is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
4	// RDMP is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
5	// You should have received a copy of the GNU General Public License along with RDMP. If not, see <https://www.gnu.org/licenses/>.
6
7	using System;
8	using System.Collections.Generic;
9	using System.IO;
10	using System.Linq;
11	using System.Linq.Expressions;
12	using Rdmp.Core.Curation.Data;
13	using Rdmp.Core.Repositories;
14
15	namespace Rdmp.Core.CommandExecution.AtomicCommands;
16
17	// Dump all compatible objects from the current platform database(s) into a
18	// YAML/JSON directory for SQL-free operation.
19	public class ExecuteCommandExportDatabaseToDir : BasicCommandExecution
20	{
21	private readonly IBasicActivateItems _activator;
22	private readonly DirectoryInfo _target;
23
NEW 24	public ExecuteCommandExportDatabaseToDir(IBasicActivateItems activator, [DemandsInitialization("Where the platform directory should be created")] string target)	×
25	{
NEW 26	_target = new DirectoryInfo(target);	×
NEW 27	_activator = activator;	×
NEW 28	}	×
29
NEW 30	private readonly List<string> ignoreList = new() { "Rdmp.Core.DataQualityEngine.Data.DQEGraphAnnotation", "Rdmp.Core.DataQualityEngine.Data.Evaluation" };	×
31
32	public override void Execute()
33	{
NEW 34	base.Execute();	×
NEW 35	var repo = new YamlRepository(_target);	×
NEW 36	foreach (var t in repo.GetCompatibleTypes())	×
37	{
NEW 38	if (ignoreList.Contains(t.FullName)) continue;	×
39	try
40	{
NEW 41	Console.WriteLine(t.FullName);	×
NEW 42	foreach (var o in _activator.GetRepositoryFor(t).GetAllObjects(t))	×
NEW 43	repo.SaveToDatabase(o);	×
NEW 44	}	×
NEW 45	catch(Exception)	×
46	{
NEW 47	Console.WriteLine($"Unable to find repo for {t.FullName}");	×
NEW 48	}	×
49
50	}
NEW 51	}	×
52	}

HicServices / RDMP / 7164468116

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