cokelaer / variant_calling / 7098492300
81%

DEFAULT BRANCH: main
Ran
Jobs 3
Files 8
Run time 1s
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coverage: 88.028% (+2.6%) from 85.393%
7098492300

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github

cokelaer 
Use version of freebayes below 1.3 (bug mamba?)

6 of 8 new or added lines in 1 file covered. (75.0%)

24 existing lines in 6 files now uncovered.

250 of 284 relevant lines covered (88.03%)

1.31 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
75.0
 sequana_pipelines/variant_calling/__init__.py

Uncovered Existing Lines

Lines Coverage ∆ File
2
75.0
 15.0% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.10/site-packages/sequana_pipelines/variant_calling/__init__.py
2
75.0
 15.0% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.8/site-packages/sequana_pipelines/variant_calling/__init__.py
2
75.0
 15.0% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.9/site-packages/sequana_pipelines/variant_calling/__init__.py
6
90.48
 3.57% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.10/site-packages/sequana_pipelines/variant_calling/main.py
6
90.48
 3.57% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.8/site-packages/sequana_pipelines/variant_calling/main.py
6
90.48
 3.57% /home/runner/micromamba-root/envs/sequana_variant_calling/lib/python3.9/site-packages/sequana_pipelines/variant_calling/main.py
Jobs
ID Job ID Ran Files Coverage
1 7098492300.1 4
87.32
2 7098492300.2 4
87.32
3 7098492300.3 4
87.32
Source Files on build 7098492300