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neurobagel / api / 7000778671
97%

Build:
DEFAULT BRANCH: main
Ran 27 Nov 2023 04:56AM UTC
Jobs 1
Files 15
Run time 2s
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27 Nov 2023 04:55AM UTC coverage: 99.748% (+0.02%) from 99.732%
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[ENH] Add support for endpoint that will return `nb:Diagnosis` options from SNOMED (#228)

* add json prettifier pre-commit hook

* add vocab file for SNOMED CT disorders

* create snomed term-label lookup from vocab file on startup

* add enum option for diagnosis

* generalize get vocab terms crud function + implement for diagnosis path param

* update docstrings

* add tests of lookup file and response contents of diagnosis vocab endpoint

* catch and raise informative warning for network errors

* test graceful handling of network error

* use new snomed terms lookup file for returning labels of available diagnoses

* remove unnecessary else statements

61 of 61 new or added lines in 7 files covered. (100.0%)

791 of 793 relevant lines covered (99.75%)

1.46 hits per line

Jobs
ID Job ID Ran Files Coverage
1 7000778671.1 27 Nov 2023 04:56AM UTC 0
95.06
GitHub Action Run
Source Files on build 7000778671
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