6245535001

Committed 20 Sep 2023 07:44AM UTC coverage: 57.013%. First build

Build # 6245535001

Build Type

push

github

Committed by

web-flow

Commit Message

8.1.0 Release (#1628)

* Bump Newtonsoft.Json from 13.0.1 to 13.0.2

Bumps [Newtonsoft.Json](https://github.com/JamesNK/Newtonsoft.Json) from 13.0.1 to 13.0.2.
- [Release notes](https://github.com/JamesNK/Newtonsoft.Json/releases)
- [Commits](https://github.com/JamesNK/Newtonsoft.Json/compare/13.0.1...13.0.2)

---
updated-dependencies:
- dependency-name: Newtonsoft.Json
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

* Bump NLog from 5.0.5 to 5.1.0

Bumps [NLog](https://github.com/NLog/NLog) from 5.0.5 to 5.1.0.
- [Release notes](https://github.com/NLog/NLog/releases)
- [Changelog](https://github.com/NLog/NLog/blob/dev/CHANGELOG.md)
- [Commits](https://github.com/NLog/NLog/compare/v5.0.5...v5.1.0)

---
updated-dependencies:
- dependency-name: NLog
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* Bump NLog from 5.0.5 to 5.1.0

* Fix -r flag - should have been --results-directory all along

* Bump Newtonsoft.Json from 13.0.1 to 13.0.2

* Bump YamlDotNet from 12.0.2 to 12.1.0

Bumps [YamlDotNet](https://github.com/aaubry/YamlDotNet) from 12.0.2 to 12.1.0.
- [Release notes](https://github.com/aaubry/YamlDotNet/releases)
- [Commits](https://github.com/aaubry/YamlDotNet/compare/v12.0.2...v12.1.0)

---
updated-dependencies:
- dependency-name: YamlDotNet
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* Bump Moq from 4.18.2 to 4.18.3

Bumps [Moq](https://github.com/moq/moq4) from 4.18.2 to 4.18.3.
- [Release notes](https://github.com/moq/moq4/releases)
- [Changelog](https://github.com/moq/moq4/blob/main/CHANGELOG.md)
- [Commits](https://github.com/moq/moq4/compare/v4.18.2...v4.18.3)

---
updated-dependencies:
- dependency-name: Moq
... (continued)

Run Details

10732 of 20257 branches covered (0.0%)

Branch coverage included in aggregate %.

48141 of 48141 new or added lines in 1086 files covered. (100.0%)

30685 of 52388 relevant lines covered (58.57%)

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Source File
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76.92

/Rdmp.Core/DataLoad/Engine/LoadExecution/Components/Runtime/MutilateDataTablesRuntimeTask.cs

// Copyright (c) The University of Dundee 2018-2019
// This file is part of the Research Data Management Platform (RDMP).
// RDMP is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
// RDMP is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
// You should have received a copy of the GNU General Public License along with RDMP. If not, see <https://www.gnu.org/licenses/>.

using System;
using Rdmp.Core.Curation.Data.DataLoad;
using Rdmp.Core.DataFlowPipeline;
using Rdmp.Core.DataLoad.Engine.Job;
using Rdmp.Core.DataLoad.Engine.LoadExecution.Components.Arguments;
using Rdmp.Core.DataLoad.Engine.Mutilators;
using Rdmp.Core.Repositories;
using Rdmp.Core.ReusableLibraryCode.Checks;
using Rdmp.Core.ReusableLibraryCode.Progress;

namespace Rdmp.Core.DataLoad.Engine.LoadExecution.Components.Runtime;

/// <summary>
/// RuntimeTask that hosts an IMutilateDataTables.  The instance is hydrated from the users configuration (ProcessTask and ProcessTaskArguments) See
/// RuntimeArgumentCollection
/// </summary>
public class MutilateDataTablesRuntimeTask : RuntimeTask, IMEFRuntimeTask
{
    //the class (built by reflection) that will do all the heavy lifting
    public IMutilateDataTables MutilateDataTables { get; set; }
    public ICheckable MEFPluginClassInstance => MutilateDataTables;

    public MutilateDataTablesRuntimeTask(IProcessTask task, RuntimeArgumentCollection args)
        : base(task, args)
    {
        //All attachers must be marked as mounting stages, and therefore we can pull out the RAW Server and Name
        var stageArgs = args.StageSpecificArguments ?? throw new NullReferenceException("Stage args was null");
        if (stageArgs.DbInfo == null)
            throw new NullReferenceException(
                "Stage args had no DbInfo, unable to mutilate tables without a database - mutilator is sad");

        if (string.IsNullOrWhiteSpace(task.Path))
            throw new ArgumentException(
                $"Path is blank for ProcessTask '{task}' - it should be a class name of type {nameof(IMutilateDataTables)}");

        MutilateDataTables = MEF.CreateA<IMutilateDataTables>(ProcessTask.Path);
        SetPropertiesForClass(RuntimeArguments, MutilateDataTables);
        MutilateDataTables.Initialize(stageArgs.DbInfo, ProcessTask.LoadStage);
    }


    public override ExitCodeType Run(IDataLoadJob job, GracefulCancellationToken cancellationToken)
    {
        job.OnNotify(this,
            new NotifyEventArgs(ProgressEventType.Information, $"About to run Task '{ProcessTask.Name}'"));
        job.OnNotify(this, new NotifyEventArgs(ProgressEventType.Information,
            $"Mutilate class is{MutilateDataTables.GetType().FullName}"));

        try
        {
            return MutilateDataTables.Mutilate(job);
        }
        catch (Exception e)
        {
            job.OnNotify(this, new NotifyEventArgs(ProgressEventType.Error,
                $"Mutilate failed on job {job} Mutilator was of type {MutilateDataTables.GetType().Name} see InnerException for specifics",
                e));
            return ExitCodeType.Error;
        }
    }

    public override bool Exists() => true;

    public override void Abort(IDataLoadEventListener postLoadEventListener)
    {
        LoadCompletedSoDispose(ExitCodeType.Abort, postLoadEventListener);
    }

    public override void Check(ICheckNotifier checker)
    {
        new MandatoryPropertyChecker(MutilateDataTables).Check(checker);
        MutilateDataTables.Check(checker);
    }


    public override void LoadCompletedSoDispose(ExitCodeType exitCode, IDataLoadEventListener postDataLoadEventListener)
    {
        MutilateDataTables.LoadCompletedSoDispose(exitCode, postDataLoadEventListener);
    }
}

1	// Copyright (c) The University of Dundee 2018-2019
2	// This file is part of the Research Data Management Platform (RDMP).
3	// RDMP is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
4	// RDMP is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
5	// You should have received a copy of the GNU General Public License along with RDMP. If not, see <https://www.gnu.org/licenses/>.
6
7	using System;
8	using Rdmp.Core.Curation.Data.DataLoad;
9	using Rdmp.Core.DataFlowPipeline;
10	using Rdmp.Core.DataLoad.Engine.Job;
11	using Rdmp.Core.DataLoad.Engine.LoadExecution.Components.Arguments;
12	using Rdmp.Core.DataLoad.Engine.Mutilators;
13	using Rdmp.Core.Repositories;
14	using Rdmp.Core.ReusableLibraryCode.Checks;
15	using Rdmp.Core.ReusableLibraryCode.Progress;
16
17	namespace Rdmp.Core.DataLoad.Engine.LoadExecution.Components.Runtime;
18
19	/// <summary>
20	/// RuntimeTask that hosts an IMutilateDataTables. The instance is hydrated from the users configuration (ProcessTask and ProcessTaskArguments) See
21	/// RuntimeArgumentCollection
22	/// </summary>
23	public class MutilateDataTablesRuntimeTask : RuntimeTask, IMEFRuntimeTask
24	{
25	//the class (built by reflection) that will do all the heavy lifting
26	public IMutilateDataTables MutilateDataTables { get; set; }	52✔
27	public ICheckable MEFPluginClassInstance => MutilateDataTables;	4✔
28
29	public MutilateDataTablesRuntimeTask(IProcessTask task, RuntimeArgumentCollection args)
30	: base(task, args)	16✔
31	{
32	//All attachers must be marked as mounting stages, and therefore we can pull out the RAW Server and Name
33	var stageArgs = args.StageSpecificArguments ?? throw new NullReferenceException("Stage args was null");	16!
34	if (stageArgs.DbInfo == null)	16!
35	throw new NullReferenceException(	×
36	"Stage args had no DbInfo, unable to mutilate tables without a database - mutilator is sad");	×
37
38	if (string.IsNullOrWhiteSpace(task.Path))	16✔
39	throw new ArgumentException(	6✔
40	$"Path is blank for ProcessTask '{task}' - it should be a class name of type {nameof(IMutilateDataTables)}");	6✔
41
42	MutilateDataTables = MEF.CreateA<IMutilateDataTables>(ProcessTask.Path);	10✔
43	SetPropertiesForClass(RuntimeArguments, MutilateDataTables);	8✔
44	MutilateDataTables.Initialize(stageArgs.DbInfo, ProcessTask.LoadStage);	8✔
45	}	8✔
46
47
48	public override ExitCodeType Run(IDataLoadJob job, GracefulCancellationToken cancellationToken)
49	{
50	job.OnNotify(this,	4✔
51	new NotifyEventArgs(ProgressEventType.Information, $"About to run Task '{ProcessTask.Name}'"));	4✔
52	job.OnNotify(this, new NotifyEventArgs(ProgressEventType.Information,	4✔
53	$"Mutilate class is{MutilateDataTables.GetType().FullName}"));	4✔
54
55	try
56	{
57	return MutilateDataTables.Mutilate(job);	4✔
58	}
59	catch (Exception e)	4✔
60	{
61	job.OnNotify(this, new NotifyEventArgs(ProgressEventType.Error,	4✔
62	$"Mutilate failed on job {job} Mutilator was of type {MutilateDataTables.GetType().Name} see InnerException for specifics",	4✔
63	e));	4✔
64	return ExitCodeType.Error;	×
65	}
66	}	×
67
68	public override bool Exists() => true;	×
69
70	public override void Abort(IDataLoadEventListener postLoadEventListener)
71	{
72	LoadCompletedSoDispose(ExitCodeType.Abort, postLoadEventListener);	×
73	}	×
74
75	public override void Check(ICheckNotifier checker)
76	{
77	new MandatoryPropertyChecker(MutilateDataTables).Check(checker);	4✔
78	MutilateDataTables.Check(checker);	4✔
79	}	4✔
80
81
82	public override void LoadCompletedSoDispose(ExitCodeType exitCode, IDataLoadEventListener postDataLoadEventListener)
83	{
84	MutilateDataTables.LoadCompletedSoDispose(exitCode, postDataLoadEventListener);	4✔
85	}	4✔
86	}

HicServices / RDMP / 6245535001

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