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biocore / metagenomics_pooling_notebook / 6112518702
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DEFAULT BRANCH: master
Ran 07 Sep 2023 04:55PM UTC
Jobs 1
Files 0
Run time 1s
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07 Sep 2023 04:44PM UTC coverage: 0.0%. Remained the same
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synDNA notebook update (#145)

* defined add_syndna() function

Added a function for absolute quant sequencing method with synthetic DNA spike in.

* Update sample_sheet.py

Moved the syndna_pool_number column from [Bioinformatics] block to [Data] block.

* moved the syndna_pool_number to [Data]

moved the syndna_pool_number to [Data] block in samplesheet

* moved add_syndna() to metapool.py

* added tests for add_syndna() function

* fixed an edit mistake

* fixed duplication of a test

* fixed tests, updated add_syndna()

fixed some typos and vestigial snippets. Incorporated feedback from review.

* styling

fixed styling

* flake8 styling fixes

styling

* Update metagenomics_pipeline_iSeqnorm.ipynb

fixed header numbering

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1 Unit Test - 6112518702.1 07 Sep 2023 04:55PM UTC 0
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