angelolab / ark-analysis / 6040954213

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Include `img_sub_folder` as parameter in Mantis calls (#1050)

* Ensure mantis can read the image sub folder specified

* Test on example dataset

* Default img_sub_folder to None in create_mantis_dir (standard used elsewhere)

* Doc fix and updated example dataset

* Update segmentation labels again

* Clarify img_sub_folder (mostly for refreshing tests)

* Force .github/get_example_dataset.py to use updated revision

* Update the file names to look for

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