angelolab / toffy / 5660515013

92%

push

github

Ensure incompletely extracted bin files get re-extracted (#392)

* Ensure incompletely extracted bin files get re-extracted

* Fix path spec for re-extraction

* Add some logging info to the re-extraction

* Only re-extract FOVs where the .bin creation time is later than the .json creation time

* getmtime -> getctime

* When checking for FOV updates at the end of a run, skip Moly points

* Clarify comment

* Test created time updates of .bin files

* Make sure to test for renaming every third file regardless of temp_bin status

* Test the Windows-specific creation time updates on CACs

* Test re-extraction process

* Use st_ctime for Linux compatibility

* Fix the creation time extraction for Linux (again)...

* Add print statements to see what's going on with Linux

* Need to print floats instead

* Change to st_ctime

* Just Path, not pathlib

* This should (hopefully) be cross-platform compatible

* Ensure the warning of re-extraction is explicitly tested against

* Documentation

* Remove extraneous comments and variables

* Fix poetry.lock and pyproject.toml

* Remove unnecessary imports

1268 of 1390 branches covered (91.22%)

Branch coverage included in aggregate %.

17 of 17 new or added lines in 1 file covered. (100.0%)

2461 of 2684 relevant lines covered (91.69%)

0.92 hits per line