griffithlab
/
pVACtools
/
4862401566
83%
master: 83%
master: 83%
|
Ran
|
Jobs
5
|
Files
101
|
Run time
23s
|
Badge
Embed ▾
README BADGES
|
github
GitHub
974 of 974 new or added lines in 25 files covered. (100.0%)
5911 of 7683 relevant lines covered (76.94%)
3.85 hits per line
New Missed Lines in Diff
| Lines | Coverage | ∆ | File |
|---|---|---|---|
| 1 |
88.66 |
-0.03% | pvactools/lib/calculate_reference_proteome_similarity.py |
| 2 |
95.12 |
pvactools/lib/combine_inputs.py | |
| 2 |
90.91 |
pvactools/lib/load_gtf_data.py | |
| 2 |
90.68 |
-1.14% | pvactools/lib/post_processor.py |
| 2 |
0.0 |
pvactools/tools/pvacsplice/__init__.py | |
| 4 |
88.46 |
-3.29% | pvactools/lib/top_score_filter.py |
| 5 |
94.05 |
pvactools/lib/fasta_to_kmers.py | |
| 5 |
84.38 |
-15.63% | pvactools/lib/sort.py |
| 6 |
79.6 |
-0.05% | pvactools/tools/pvacvector/run.py |
| 10 |
0.0 |
pvactools/lib/load_ensembl_data.py | |
| 10 |
88.6 |
-11.4% | pvactools/lib/run_argument_parser.py |
| 14 |
85.65 |
-1.9% | pvactools/lib/pipeline.py |
| 14 |
0.0 |
pvactools/tools/pvacsplice/gtf_to_tsv.py | |
| 17 |
86.57 |
-2.42% | pvactools/lib/aggregate_all_epitopes.py |
| 25 |
0.0 |
pvactools/tools/pvacsplice/main.py | |
| 26 |
80.3 |
pvactools/lib/junction_to_fasta.py | |
| 27 |
0.0 |
pvactools/lib/print_log.py | |
| 68 |
80.43 |
-8.62% | pvactools/lib/output_parser.py |
| 95 |
72.2 |
-14.83% | pvactools/lib/input_file_converter.py |
| 116 |
0.0 |
pvactools/lib/splice_pipeline.py | |
| 144 |
0.0 |
pvactools/tools/pvacsplice/run.py |
Uncovered Existing Lines
| Lines | Coverage | ∆ | File |
|---|---|---|---|
| 3 |
88.6 |
-11.4% | pvactools/lib/run_argument_parser.py |
Jobs
| ID | Job ID | Ran | Files | Coverage | |
|---|---|---|---|---|---|
| 1 | 4862401566.1 | 101 |
77.12 |
||
| 2 | 4862401566.2 | 101 |
76.89 |
||
| 3 | 4862401566.3 | 101 |
77.09 |
||
| 4 | 4862401566.4 | 101 |
77.12 |
||
| 5 | 4862401566.5 | 101 |
77.09 |
