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angelolab / ark-analysis / 7687
95%
master: 94%

Build:
Build:
LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Ran 05 Feb 2023 05:15PM UTC
Jobs 1
Files 34
Run time 1s
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Allow user to set an explicit skip flag for custom regionprops and marker extraction functionality in notebook 1 (#897)

* Print outs for cell table timing

* New torch implementation

* Allow cell table to be created by skipping custom regionprops and channel expression calculations

* Remove torch import

* Centroid kwargs only need to be created if skip_extraction=False

* PYCODESTYLE

* Leave marker extraction in regardless of skip_extraction flag setting

* Remove any timeit calls

* Change skip_extraction to fast_extraction

* Add fast_extraction param to notebook

2996 of 3154 relevant lines covered (94.99%)

0.95 hits per line

Jobs
ID Job ID Ran Files Coverage
1 7687.1 (MPLBACKEND=Agg) 05 Feb 2023 05:15PM UTC 34
94.99
Travis Job 7687.1
Source Files on build 7687
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  • Changed 1
  • Source Changed 1
  • Coverage Changed 1
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
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