int-brain-lab / ibllib / 3751665491884742
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3751665491884742

Pull #524

continuous-integration/UCL

Olivier Winter 
SpikeSortingLoader pid2ref method for labels
Pull Request #524: Wheel smooth

61 of 61 new or added lines in 9 files covered. (100.0%)

1101 of 17977 relevant lines covered (6.12%)

0.06 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
5.26
 -33.75% ibllib/ephys/ephysqc.py
1
2.4
 -91.62% ibllib/pipes/dynamic_pipeline.py
2
2.68
 -55.78% brainbox/io/one.py
4
9.57
 -9.7% ibllib/atlas/plots.py
4
7.14
 -83.93% ibllib/io/extractors/widefield.py
5
13.84
 -64.69% brainbox/behavior/wheel.py
8
0.0
 -99.41% ibllib/io/extractors/camera.py
13
21.34
 -45.89% ibllib/atlas/atlas.py
20
3.77
 -78.45% ibllib/pipes/widefield_tasks.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
0.0
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1
0.0
 -100.0% ibllib/dsp/utils.py
1
0.0
 -100.0% ibllib/io/extractors/default_channel_maps.py
3
36.36
 -13.64% ibllib/misc/misc.py
7
0.0
 -100.0% ibllib/io/spikeglx.py
8
9.24
 -6.72% brainbox/modeling/utils.py
8
0.0
 -100.0% ibllib/ephys/neuropixel.py
9
33.33
 -50.0% brainbox/core.py
9
40.91
 -40.91% ibllib/atlas/genes.py
11
0.0
 -21.57% ibllib/io/extractors/passive_plotting.py
11
25.0
 -22.92% ibllib/io/globus.py
13
9.36
 -6.4% brainbox/population/cca.py
13
23.53
 -76.47% ibllib/io/misc.py
15
0.0
 -28.85% ibllib/oneibl/aws.py
16
8.45
 -11.27% ibllib/pipes/local_server.py
17
10.74
 -11.41% ibllib/plots/misc.py
19
0.0
 -7.69% brainbox/ephys_plots.py
19
0.0
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19
9.57
 -9.7% ibllib/atlas/plots.py
19
0.0
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22
0.0
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23
22.58
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24
0.0
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25
10.34
 -86.21% brainbox/video.py
27
12.5
 -84.38% ibllib/io/ffmpeg.py
28
9.17
 -23.33% ibllib/ephys/spikes.py
29
0.0
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31
5.88
 -91.26% ibllib/pipes/audio_tasks.py
33
12.82
 -84.62% ibllib/io/extractors/bpod_trials.py
34
12.78
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34
23.08
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35
4.91
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40
0.0
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44
10.71
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45
5.77
 -86.54% ibllib/io/extractors/habituation_trials.py
46
6.02
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49
12.12
 -74.24% brainbox/singlecell.py
52
3.66
 -63.81% ibllib/pipes/training_preprocessing.py
54
4.55
 -19.15% ibllib/oneibl/registration.py
58
2.78
 -17.9% ibllib/pipes/histology.py
59
9.76
 -47.97% brainbox/processing.py
61
0.0
 -96.83% ibllib/pipes/scan_fix_passive_files.py
63
12.94
 -74.12% brainbox/behavior/pyschofit.py
63
8.57
 -60.0% ibllib/io/extractors/training_audio.py
67
3.77
 -78.45% ibllib/pipes/widefield_tasks.py
67
19.4
 -50.0% ibllib/qc/dlc.py
72
6.83
 -44.72% brainbox/task/trials.py
74
5.4
 -27.58% ibllib/oneibl/patcher.py
74
0.0
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76
2.44
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81
0.0
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86
12.4
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0.0
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88
7.84
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89
3.92
 -87.25% ibllib/qc/task_extractors.py
90
7.14
 -83.93% ibllib/io/extractors/widefield.py
93
9.22
 -45.15% brainbox/modeling/design_matrix.py
94
5.17
 -81.15% ibllib/io/video.py
96
0.98
 -94.17% ibllib/pipes/base_tasks.py
97
13.84
 -64.69% brainbox/behavior/wheel.py
98
12.64
 -35.38% brainbox/behavior/training.py
99
2.73
 -90.38% ibllib/pipes/video_tasks.py
102
5.26
 -33.75% ibllib/ephys/ephysqc.py
109
0.73
 -79.56% ibllib/pipes/behavior_tasks.py
110
6.72
 -82.09% ibllib/io/session_params.py
111
13.02
 -65.68% brainbox/population/decode.py
111
6.34
 -78.38% ibllib/io/extractors/base.py
131
12.03
 -82.91% ibllib/atlas/flatmaps.py
132
10.56
 -73.33% brainbox/task/closed_loop.py
134
0.0
 -58.7% ibllib/io/extractors/video_motion.py
136
6.55
 -80.95% ibllib/ephys/sync_probes.py
137
0.0
 -63.72% ibllib/pipes/ephys_alignment.py
140
17.71
 -48.61% brainbox/plot_base.py
152
2.4
 -91.62% ibllib/pipes/dynamic_pipeline.py
176
21.9
 -72.73% ibllib/atlas/regions.py
178
2.75
 -81.72% ibllib/io/extractors/training_wheel.py
196
0.9
 -44.14% ibllib/pipes/training_status.py
207
1.72
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216
3.14
 -56.65% ibllib/pipes/tasks.py
241
3.28
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287
3.56
 -78.63% ibllib/io/raw_data_loaders.py
294
21.34
 -45.89% ibllib/atlas/atlas.py
296
3.95
 -90.04% ibllib/io/extractors/ephys_fpga.py
328
3.43
 -53.58% ibllib/pipes/misc.py
331
2.68
 -55.78% brainbox/io/one.py
335
0.0
 -99.41% ibllib/io/extractors/camera.py
336
1.36
 -91.33% ibllib/io/extractors/training_trials.py
355
2.88
 -92.94% ibllib/qc/task_metrics.py
384
1.2
 -51.58% ibllib/pipes/ephys_preprocessing.py
442
0.88
 -77.89% ibllib/qc/camera.py
Jobs
ID Job ID Ran Files Coverage
1 Integration - 3751665491884742.1 133
6.12
Source Files on build 3751665491884742