Ensembl / ensembl-vep / 2884
98%
master: 98%

LAST BUILD BRANCH: uploaded_allele_fix
DEFAULT BRANCH: master
Ran
Jobs 5
Files 115
Run time 5s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2884

push

travis-ci-com

web-flow 
Merge pull request #1267 from nuno-agostinho/improve-docker

Support environment variables as arguments for VEP and INSTALL.pl

14 of 14 new or added lines in 1 file covered. (100.0%)

10489 of 10656 relevant lines covered (98.43%)

11096.65 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
7
92.56
 -5.55% modules/Bio/EnsEMBL/VEP/Config.pm

Uncovered Existing Lines

Lines Coverage ∆ File
1
89.74
 -0.26% modules/Bio/EnsEMBL/VEP/AnnotationType/Variation.pm
1
98.49
 -0.49% modules/Bio/EnsEMBL/VEP/BaseVEP.pm
1
94.74
 0.29% modules/Bio/EnsEMBL/VEP/OutputFactory/BaseTab.pm
1
95.65
 0.02% modules/Bio/EnsEMBL/VEP/OutputFactory.pm
1
97.66
 0.08% modules/Bio/EnsEMBL/VEP/OutputFactory/VCF.pm
1
99.47
 -0.53% t/AnnotationSource_Database_Transcript.t
2
90.32
 -1.72% modules/Bio/EnsEMBL/VEP/AnnotationSource/Database/RegFeat.pm
Jobs
ID Job ID Ran Files Coverage
1 2884.1 (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[secure] COVERALLS=true DB=mysql) 115
98.43
 Travis Job 2884.1
2 2884.2 (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[secure] COVERALLS=true DB=mysql) 115
98.43
 Travis Job 2884.2
3 2884.3 (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[secure] COVERALLS=true DB=mysql) 115
98.43
 Travis Job 2884.3
4 2884.4 (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[secure] COVERALLS=true DB=mysql) 115
98.45
 Travis Job 2884.4
5 2884.5 (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[secure] COVERALLS=true DB=mysql) 115
98.45
 Travis Job 2884.5
Source Files on build 2884