• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

angelolab / ark-analysis / 6164
95%
master: 94%

Build:
Build:
LAST BUILD BRANCH: main
DEFAULT BRANCH: master
Ran 08 Sep 2022 10:35PM UTC
Jobs 1
Files 35
Run time 2s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

pending completion
6164

push

travis-ci-com

web-flow
Example Dataset (#685)

* added datasets as requirement

* added dataset download function

* doc test fix

* Notebook 1 updated for example dataset

* Remove call to is_mibitiff cell in testbook script

* removed data/* and added data/ to the .gitignore

* Remove .DS_Store, change input_dir variable back to tiff_dir (more intuitive), and update notebook tests

* Remove MIBItiff test

* Change input_dir to tiff_dir

* Nuke another instance of input_dir

* added original dataset back in so tests can pass

* updated nb1 and nb2 to use segmentation/

* nb3 paths fixed

* reverted pixie subdir for nb2,3

* Change testbook path to reflect new directory structure

* Remove unneeded cell outputs

* LDA path updates

* remove test import

* Prevent division by NA if a column is all 0

* `cell_size` of 0 fixed, deepcell_service_utils::_convert_deepcell_seg_masks, change dtype from int16 to int32

* deepcell bytes conversion fix + test

* seaborn fix

* removed changes for nb2, nb3, nb4

* removed changes for LDA, example neighborhood analysis, visualization notebooks

* revert pixel clustering test

* testbook fix

* testbook fix

* dataset download test

* reverted pytest-randomly

* made requested changes

* download dataset function, will save to default cache location, and copy data over to ark-analysis/data

* test fix

* fixed paths

* nb1 fix

Co-authored-by: alex-l-kong <alkong@ucdavis.edu>
Co-authored-by: csowers <camisowers@g.ucla.edu>

11 of 11 new or added lines in 2 files covered. (100.0%)

2959 of 3127 relevant lines covered (94.63%)

0.95 hits per line

Jobs
ID Job ID Ran Files Coverage
1 6164.1 (MPLBACKEND=Agg) 08 Sep 2022 10:35PM UTC 0
94.63
Travis Job 6164.1
Source Files on build 6164
Detailed source file information is not available for this build.
  • Back to Repo
  • Build #6164
  • da41621f on github
  • Prev Build on main (#6086)
  • Next Build on main (#6175)
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2026 Coveralls, Inc