int-brain-lab / ibllib / 9601661851317936
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9601661851317936

Pull #504

coverage/UCL

Miles Wells 
Return None when params file doesn't exist
Pull Request #504: Widefield2

2183 of 2183 new or added lines in 40 files covered. (100.0%)

15 of 17600 relevant lines covered (0.09%)

0.0 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
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 -58.21% brainbox/io/one.py
1
0.0
 ibllib/io/extractors/default_channel_maps.py
1
0.0
 -100.0% ibllib/misc/__init__.py
2
0.0
 -72.07% ibllib/atlas/atlas.py
2
0.0
 -100.0% ibllib/dsp/__init__.py
2
0.0
 -100.0% ibllib/ephys/neuropixel.py
2
0.0
 -75.0% ibllib/exceptions.py
2
0.0
 -100.0% ibllib/io/spikeglx.py
2
0.0
 -66.67% ibllib/pipes/training_preprocessing.py
3
0.0
 -100.0% ibllib/pipes/__init__.py
4
0.0
 -94.64% ibllib/atlas/flatmaps.py
6
0.0
 -67.62% ibllib/io/extractors/training_audio.py
7
0.0
 -85.21% ibllib/io/extractors/base.py
8
0.0
 -86.5% ibllib/ephys/sync_probes.py
10
0.0
 -52.48% ibllib/pipes/ephys_preprocessing.py
12
0.0
 -86.67% ibllib/io/ffmpeg.py
12
0.0
 -24.63% ibllib/oneibl/registration.py
14
0.0
 -39.14% ibllib/ephys/ephysqc.py
27
0.0
 ibllib/pipes/fibrephotometry.py
27
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 -19.2% ibllib/pipes/local_server.py
28
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 -94.23% ibllib/io/extractors/ephys_fpga.py
29
0.0
 -99.38% ibllib/io/extractors/camera.py
31
0.0
 -84.46% ibllib/io/raw_data_loaders.py
32
0.0
 -31.5% ibllib/ephys/spikes.py
32
0.0
 -72.82% ibllib/io/extractors/ephys_passive.py
34
0.0
 ibllib/pipes/audio_tasks.py
35
0.0
 ibllib/io/extractors/fibrephotometry.py
39
0.0
 -56.43% ibllib/pipes/tasks.py
53
0.0
 ibllib/io/raw_daq_loaders.py
82
0.0
 ibllib/pipes/sync_tasks.py
89
0.0
 ibllib/pipes/widefield_tasks.py
93
0.0
 -90.4% ibllib/qc/camera.py
102
0.0
 ibllib/pipes/base_tasks.py
110
0.0
 ibllib/pipes/video_tasks.py
111
0.0
 ibllib/io/extractors/widefield.py
129
0.0
 ibllib/io/session_params.py
136
0.0
 ibllib/pipes/behavior_tasks.py
160
0.0
 ibllib/pipes/dynamic_pipeline.py
258
0.0
 -43.73% ibllib/pipes/misc.py
455
0.0
 ibllib/pipes/ephys_tasks.py

Uncovered Existing Lines

Lines Coverage ∆ File
1
0.0
 -100.0% ibllib/dsp/smooth.py
1
0.0
 -100.0% ibllib/dsp/utils.py
1
0.0
 -100.0% ibllib/io/__init__.py
1
0.0
 -100.0% ibllib/pipes/__init__.py
1
0.0
 -100.0% ibllib/plots/__init__.py
2
0.0
 -100.0% ibllib/atlas/__init__.py
4
0.0
 -12.5% brainbox/metrics/electrode_drift.py
5
0.0
 -100.0% ibllib/io/spikeglx.py
6
0.0
 -100.0% ibllib/ephys/neuropixel.py
8
0.0
 -9.62% brainbox/task/_knockoff.py
10
0.0
 -100.0% ibllib/dsp/__init__.py
11
0.0
 -21.57% ibllib/io/extractors/passive_plotting.py
11
0.0
 -40.0% ibllib/misc/misc.py
12
0.0
 -75.0% ibllib/exceptions.py
12
0.0
 -23.08% ibllib/io/extractors/habituation_trials.py
13
0.0
 -83.33% brainbox/core.py
15
0.0
 -28.85% ibllib/oneibl/aws.py
17
0.0
 -100.0% ibllib/io/misc.py
17
0.0
 -19.57% ibllib/qc/critical_reasons.py
19
0.0
 -7.69% brainbox/ephys_plots.py
19
0.0
 -15.97% brainbox/modeling/utils.py
19
0.0
 -8.16% brainbox/plot.py
19
0.0
 -60.61% ibllib/io/extractors/opto_trials.py
19
0.0
 -86.67% ibllib/io/ffmpeg.py
23
0.0
 -47.92% ibllib/io/globus.py
24
0.0
 -19.2% ibllib/pipes/local_server.py
24
0.0
 -10.92% ibllib/qc/alignment_qc.py
27
0.0
 -96.55% brainbox/video.py
30
0.0
 -96.77% ibllib/time.py
32
0.0
 -14.04% brainbox/metrics/single_units.py
32
0.0
 -15.76% brainbox/population/cca.py
33
0.0
 -22.3% ibllib/plots/misc.py
34
0.0
 -89.74% ibllib/io/extractors/bpod_trials.py
36
0.0
 -19.27% ibllib/atlas/plots.py
38
0.0
 -31.5% ibllib/ephys/spikes.py
43
0.0
 -26.83% ibllib/plots/snapshot.py
50
0.0
 -89.29% ibllib/pipes/transfer_rig_data.py
51
0.0
 -38.35% ibllib/io/flags.py
53
0.0
 -66.67% ibllib/pipes/training_preprocessing.py
56
0.0
 -86.36% brainbox/singlecell.py
56
0.0
 -28.16% ibllib/oneibl/data_handlers.py
60
0.0
 -52.14% ibllib/qc/base.py
61
0.0
 -96.83% ibllib/pipes/scan_fix_passive_files.py
62
0.0
 -27.83% brainbox/task/_statsmodels.py
63
0.0
 -24.63% ibllib/oneibl/registration.py
65
0.0
 -67.62% ibllib/io/extractors/training_audio.py
67
0.0
 -20.68% ibllib/pipes/histology.py
70
0.0
 -57.72% brainbox/processing.py
73
0.0
 -87.06% brainbox/behavior/pyschofit.py
74
0.0
 -16.01% ibllib/plots/figures.py
81
0.0
 -28.28% brainbox/behavior/dlc.py
83
0.0
 -51.55% brainbox/task/trials.py
87
0.0
 -96.81% ibllib/io/extractors/biased_trials.py
89
0.0
 -32.98% ibllib/oneibl/patcher.py
90
0.0
 -88.24% ibllib/qc/task_extractors.py
91
0.0
 -69.4% ibllib/qc/dlc.py
93
0.0
 -94.0% brainbox/task/passive.py
99
0.0
 -86.32% ibllib/io/video.py
101
0.0
 -79.07% brainbox/io/spikeglx.py
111
0.0
 -54.37% brainbox/modeling/design_matrix.py
113
0.0
 -85.21% ibllib/io/extractors/base.py
116
0.0
 -39.14% ibllib/ephys/ephysqc.py
127
0.0
 -78.53% brainbox/behavior/wheel.py
132
0.0
 -78.7% brainbox/population/decode.py
133
0.0
 -48.01% brainbox/behavior/training.py
134
0.0
 -58.7% ibllib/io/extractors/video_motion.py
135
0.0
 -63.38% ibllib/pipes/ephys_alignment.py
138
0.0
 -86.5% ibllib/ephys/sync_probes.py
149
0.0
 -84.27% brainbox/task/closed_loop.py
155
0.0
 -91.76% ibllib/atlas/regions.py
157
0.0
 -94.64% ibllib/atlas/flatmaps.py
160
0.0
 -43.73% ibllib/pipes/misc.py
184
0.0
 -84.47% ibllib/io/extractors/training_wheel.py
189
0.0
 -56.43% ibllib/pipes/tasks.py
191
0.0
 -66.32% brainbox/plot_base.py
191
0.0
 -72.82% ibllib/io/extractors/ephys_passive.py
200
0.0
 -45.25% ibllib/pipes/training_status.py
283
0.0
 -94.23% ibllib/io/extractors/ephys_fpga.py
284
0.0
 -84.46% ibllib/io/raw_data_loaders.py
308
0.0
 -99.38% ibllib/io/extractors/camera.py
335
0.0
 -87.99% ibllib/qc/task_metrics.py
340
0.0
 -58.21% brainbox/io/one.py
344
0.0
 -93.47% ibllib/io/extractors/training_trials.py
383
0.0
 -52.48% ibllib/pipes/ephys_preprocessing.py
421
0.0
 -72.07% ibllib/atlas/atlas.py
428
0.0
 -90.4% ibllib/qc/camera.py
Jobs
ID Job ID Ran Files Coverage
1 Integration - 9601661851317936.1 132
0.09
Source Files on build 9601661851317936